SMTL ID : 5igo.1 (3 other biounits)

WD40 domain of Arabidopsis thaliana E3 Ubiquitin Ligase COP1 in complex with peptide from Trib1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x SER- ASP- GLN- ILE- VAL- PRO- GLU- TYR: Tribbles homolog 1(Non-covalent)

SER-ASP-GLN-ILE-VAL-PRO-GLU-TYR.1: 19 residues within 4Å: Chain A: I.34, S.36, V.52, K.83, Y.102, W.128, D.145, A.167, N.168, C.170, A.187, D.188, H.189, A.212, S.214, T.229, K.254, N.255, F.256 25 PLIP interactions: 25 interactions with chain A Hydrophobic interactions: A:I.34, A:V.52, A:A.167, A:N.168, A:A.187, A:D.188, A:A.212, A:T.229, A:F.256 Hydrogen bonds: A:Y.102, A:Y.102, A:A.187, A:A.187, A:K.254, A:N.255, A:F.256 Water bridges: A:K.83, A:K.83, A:S.85, A:R.126, A:R.126, A:R.126, A:A.212 Salt bridges: A:K.83, A:H.189

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Uljon, S. et al., Structural Basis for Substrate Selectivity of the E3 Ligase COP1. Structure (2016)

Release Date

2016-04-20

Peptides

E3 ubiquitin-protein ligase COP1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase COP1

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