SMTL ID : 5ih2.2 (1 other biounit)

Structure, thermodynamics, and the role of conformational dynamics in the interactions between the N-terminal SH3 domain of CrkII and proline-rich motifs in cAbl

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

2 x P4G: 1-ETHOXY-2-(2-ETHOXYETHOXY)ETHANE(Non-covalent)

P4G.1: 4 residues within 4Å: Chain A: I.25, R.27, D.41, S.42 No protein-ligand interaction detected (PLIP) P4G.3: 5 residues within 4Å: Chain A: F.8, D.9, K.22 Chain B: Y.2, K.4 5 PLIP interactions: 3 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:Y.2, A:F.8 Hydrogen bonds: B:K.4, A:D.9 Water bridges: B:K.4

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: G.12, D.14, E.15, D.17 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.14, A:D.17

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bhatt, V.S. et al., Binding Mechanism of the N-Terminal SH3 Domain of CrkII and Proline-Rich Motifs in cAbl. Biophys.J. (2016)

Release Date

2016-06-29

Peptides

Adapter molecule crk: A
Proline rich Peptide: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
N

Adapter molecule crk

Proline rich Peptide

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