SMTL ID : 5ihj.1

Fusion of Maltose-binding Protein and PilA from Acinetobacter baumannii BIDMC57

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x GLC- GLC- GLC: alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose(Non-functional Binders)

GLC-GLC-GLC.1: 19 residues within 4Å: Chain A: N.13, D.15, K.16, E.45, E.46, W.63, A.64, D.66, R.67, E.112, E.154, P.155, Y.156, F.157, W.231, M.331, W.341, Y.342, R.345 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.45, A:R.67, A:Y.342, A:Y.342

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 8 residues within 4Å: Chain A: F.170, I.179, K.180, V.182, Q.336, A.369, A.370, Y.373 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.179, A:V.182, A:A.369, A:Y.373

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: N.19, E.23, K.296, D.297 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.23, A:K.296 GOL.4: 2 residues within 4Å: Chain A: S.485, G.486 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.486 GOL.5: 5 residues within 4Å: Chain A: T.194, D.198, K.201, T.357, V.358 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.194, A:V.358 GOL.6: 3 residues within 4Å: Chain A: N.119, G.221, A.240 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.240 Water bridges: A:N.242

3 x CA: CALCIUM ION(Non-covalent)

CA.7: 4 residues within 4Å: Chain A: E.46, R.67, S.338, Y.342 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:S.338 CA.8: 1 residues within 4Å: Chain A: T.346 No protein-ligand interaction detected (PLIP) CA.9: 1 residues within 4Å: Chain A: D.121 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.121, H2O.3, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Piepenbrink, K.H. et al., Structural Diversity in the Type IV Pili of Multidrug-resistant Acinetobacter. J.Biol.Chem. (2016)

Release Date

2016-09-21

Peptides

Maltose-binding periplasmic protein,Fimbrial protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Maltose-binding periplasmic protein,Fimbrial protein