SMTL ID : 5ihp.2 (1 other biounit)

Crystal Structure of Cobyrinic Acid a,c-diamide synthase from Mycobacterium smegmatis with bound ADP and Magnesium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 11 residues within 4Å: Chain A: G.21, V.22, A.23, K.24, T.25, T.26, L.192, P.221, R.222, T.223 Ligands: MG.2 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:G.21, A:V.22, A:A.23, A:K.24, A:T.25, A:T.26, A:T.26, A:P.221, A:T.223 Water bridges: A:K.24, A:K.24 Salt bridges: A:K.24

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 3 residues within 4Å: Chain A: T.25, D.132 Ligands: ADP.1 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.25, H2O.1, H2O.1, H2O.1, H2O.2

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Davies, D.R. et al., Crystal Structure of Cobyrinic Acid a,c-diamide synthase from Mycobacterium smegmatis with bound ATP analog and Magnesium. TO BE PUBLISHED

Release Date

2016-03-30

Peptides

Cobyrinic Acid a,c-diamide synthase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Cobyrinic Acid a,c-diamide synthase

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