SMTL ID : 5iis.1

Design, synthesis and structure activity relationship of potent pan-PIM kinase inhibitors derived from the pyridyl-amide scaffold

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 9 residues within 4Å: Chain A: F.99, I.102, D.139, E.140, Y.176, D.203, G.207, D.208, I.209 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.139, A:E.140, A:D.208

1 x 6CB: 3-amino-N-(2'-amino-6'-methyl[4,4'-bipyridin]-3-yl)-6-(2-fluorophenyl)pyridine-2-carboxamide(Non-covalent)

6CB.2: 18 residues within 4Å: Chain A: L.13, G.14, F.18, V.21, A.34, K.36, I.73, L.89, E.90, R.91, P.92, V.95, D.97, E.140, N.141, L.143, I.154, D.155 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:L.13, A:F.18, A:A.34, A:V.95, A:L.143, A:L.143, A:I.154 Hydrogen bonds: A:E.90, A:D.97, A:E.140 Water bridges: A:D.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nishiguchi, G.A. et al., Design, synthesis and structure activity relationship of potent pan-PIM kinase inhibitors derived from the pyridyl carboxamide scaffold. Bioorg.Med.Chem.Lett. (2016)

Release Date

2016-04-06

Peptides

Serine/threonine-protein kinase pim-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase pim-1

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