SMTL ID : 5ij5.1

Crystal structure of Equine Serum Albumin in the presence of 50 mM zinc at pH 4.5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

15 x ZN: ZINC ION(Non-covalent)

ZN.1: 1 residues within 4Å: Chain A: H.451 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.451, H2O.5, H2O.5, H2O.5 ZN.2: 1 residues within 4Å: Chain A: H.145 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.145, H2O.4, H2O.5, H2O.5 ZN.3: 1 residues within 4Å: Chain A: H.534 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.534, H2O.3, H2O.4, H2O.5 ZN.4: 1 residues within 4Å: Chain A: H.18 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.18, H2O.5, H2O.5, H2O.6 ZN.5: 2 residues within 4Å: Chain A: D.311, H.317 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.311, A:D.311, A:H.317, H2O.2, H2O.4 ZN.6: 1 residues within 4Å: Chain A: D.478 2 PLIP interactions: 1 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.478, H2O.3 ZN.7: 2 residues within 4Å: Chain A: H.67, D.248 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.67, A:D.248, A:D.248, H2O.4, H2O.4 ZN.8: 2 residues within 4Å: Chain A: H.509, D.511 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.509, A:D.511, H2O.2, H2O.4 ZN.9: 2 residues within 4Å: Chain A: E.97, E.100 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:E.97, A:E.97, A:E.100 ZN.10: 1 residues within 4Å: Chain A: H.246 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:H.246, H2O.4, H2O.5, H2O.5 ZN.11: 3 residues within 4Å: Chain A: E.152, H.156, H.287 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.152, A:H.156, A:H.287, H2O.5 ZN.12: 2 residues within 4Å: Chain A: H.3, E.6 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.3, A:E.6, A:E.6, H2O.1, H2O.3 ZN.13: 3 residues within 4Å: Chain A: Y.149, L.237, H.241 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:Y.149, A:H.241, H2O.1, H2O.2 ZN.14: 2 residues within 4Å: Chain A: E.517, K.524 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.517, H2O.1, H2O.4, H2O.4 ZN.15: 2 residues within 4Å: Chain A: H.3, E.57 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.57, A:E.57, H2O.3, H2O.5

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.16: 3 residues within 4Å: Chain A: G.206, E.207, R.208 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.207, A:R.208

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Handing, K.B. et al., Circulatory zinc transport is controlled by distinct interdomain sites on mammalian albumins. Chem Sci (2016)

Release Date

2016-03-16

Peptides

Serum albumin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serum albumin

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