SMTL ID : 5il2.1

Crystal structure of SAH-bound METTL3-METTL14 complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

hetero-oligomer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 18 residues within 4Å: Chain A: C.8, D.9, I.10, R.11, D.27, P.29, L.41, S.143, H.144, K.145, E.164, F.166, R.168, H.170, N.171, G.180, N.181, Q.182 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:D.9, A:I.10, A:D.27, A:S.143, A:K.145, A:N.171, A:N.181, A:N.181, A:Q.182 Water bridges: A:E.164 Salt bridges: A:H.144, A:H.170 pi-Stacking: A:F.166, A:F.166

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: N.77, Y.81, E.82, R.83 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:N.77, A:Y.81, A:R.83 Water bridges: B:D.134 EDO.3: 3 residues within 4Å: Chain A: W.107 Chain B: R.146, I.184 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:R.146 Water bridges: B:V.188 EDO.4: 7 residues within 4Å: Chain B: L.82, E.84, W.126, K.218, I.222, F.223, H.237 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:W.126 EDO.5: 4 residues within 4Å: Chain A: H.106 Chain B: K.189, R.190, S.191 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.190, B:S.191, B:S.191

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, X. et al., Structural basis of N6-adenosine methylation by the METTL3-METTL14 complex. Nature (2016)

Release Date

2016-05-25

Peptides

METTL3: A
METTL14: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

METTL3

METTL14

Related Entries With Identical Sequence