SMTL ID : 5is8.1

Crystal structure of mouse CARM1 in complex with inhibitor SA0271

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.71 Å

Oligo State

homo-tetramer

Ligands

3 x 6D1: 5'-{[(3S)-3-amino-3-carboxypropyl](2-chloroethyl)amino}-5'-deoxyadenosine(Non-covalent)

6D1.1: 26 residues within 4Å: Chain A: Y.24, F.25, Y.28, Q.34, M.37, M.38, R.43, G.67, C.68, G.69, S.70, I.72, L.73, V.88, E.89, A.90, S.91, G.115, K.116, V.117, E.118, E.132, P.133, M.134, M.143, S.146 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:Q.34, A:Q.34, A:C.68, A:E.89, A:E.89, A:A.90, A:S.91, A:V.117, A:S.146 Salt bridges: A:R.43, A:E.132 pi-Stacking: A:F.25, A:F.25 6D1.4: 27 residues within 4Å: Chain B: Y.24, F.25, Y.28, Q.34, M.37, R.43, G.67, C.68, G.69, S.70, G.71, I.72, L.73, V.88, E.89, A.90, S.91, G.115, K.116, V.117, E.118, E.132, P.133, M.134, E.141, M.143, S.146 12 PLIP interactions: 12 interactions with chain B Hydrogen bonds: B:Q.34, B:C.68, B:S.70, B:E.89, B:E.89, B:A.90, B:S.91, B:V.117, B:E.118 Salt bridges: B:R.43, B:E.132 pi-Stacking: B:F.25 6D1.7: 25 residues within 4Å: Chain D: Y.24, F.25, Y.28, Q.34, M.37, R.43, G.67, C.68, G.69, S.70, G.71, I.72, L.73, V.88, E.89, A.90, S.91, G.115, K.116, V.117, E.118, E.132, M.134, M.143, S.146 10 PLIP interactions: 10 interactions with chain D Hydrogen bonds: D:Q.34, D:C.68, D:E.89, D:E.89, D:A.90, D:S.91, D:V.117, D:S.146 Salt bridges: D:R.43, D:E.132

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: D.267, W.278, S.280 No protein-ligand interaction detected (PLIP) EDO.3: 4 residues within 4Å: Chain A: Y.24, F.27, Y.28, K.345 No protein-ligand interaction detected (PLIP) EDO.6: 3 residues within 4Å: Chain C: Q.23, Y.24, Y.28 No protein-ligand interaction detected (PLIP)

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.5: 25 residues within 4Å: Chain C: Y.24, F.25, Y.28, Q.34, M.37, M.38, R.43, G.67, C.68, G.69, S.70, G.71, I.72, L.73, V.88, E.89, A.90, S.91, G.115, K.116, V.117, E.118, E.132, M.143, S.146 11 PLIP interactions: 11 interactions with chain C Hydrogen bonds: C:Q.34, C:G.67, C:S.70, C:E.89, C:E.89, C:A.90, C:S.91, C:V.117, C:E.118 Salt bridges: C:R.43 pi-Stacking: C:F.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cura, V. et al., Crystal structure of mouse CARM1 in complex with inhibitor SA0271. To Be Published

Release Date

2017-03-15

Peptides

Histone-arginine methyltransferase CARM1: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
D

D
C

Histone-arginine methyltransferase CARM1