SMTL ID : 5isx.1 (1 other biounit)

Structure of the holo PCP-E didomain of the gramicidin S synthetase A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.34 Å

Oligo State

monomer

Ligands

1 x PNS: 4'-PHOSPHOPANTETHEINE(Covalent)

PNS.1: 18 residues within 4Å: Chain A: D.36, S.37, I.38, Q.110, H.217, D.221, G.222, E.329, I.330, N.331, E.356, G.357, H.358, T.377, K.409, N.439, Y.440, L.441 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:I.38, A:I.330, A:L.441 Hydrogen bonds: A:S.37, A:N.331, A:N.331, A:H.358, A:N.439, A:Y.440 Water bridges: A:Y.440, A:Y.440 Salt bridges: A:H.358, A:K.409

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain A: E.80, I.83, V.84, E.85, K.255 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.85, A:K.255, A:K.255

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, W.H. et al., Interdomain and Intermodule Organization in Epimerization Domain Containing Nonribosomal Peptide Synthetases. Acs Chem.Biol. (2016)

Release Date

2016-06-29

Peptides

Gramicidin S synthase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Gramicidin S synthase 1

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