SMTL ID : 5it3.2 (1 other biounit)

Swirm domain of human Lsd1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

homo-dimer

Ligands

4 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 1 residues within 4Å: Chain A: L.1 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:L.1, H2O.2, H2O.3, H2O.3, H2O.4 MG.2: 4 residues within 4Å: Chain A: Q.54, E.57 Chain B: Q.54 Ligands: MG.4 No protein-ligand interaction detected (PLIP) MG.3: 1 residues within 4Å: Chain B: L.1 5 PLIP interactions: 1 interactions with chain B, 4 Ligand-Water interactions Metal complexes: B:L.1, H2O.6, H2O.6, H2O.7, H2O.8 MG.4: 4 residues within 4Å: Chain A: Q.54 Chain B: Q.54, E.57 Ligands: MG.2 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hu, R. et al., A Tlx-interacting peptide of Lsd1 inhibits the proliferation of brain tumor stem cells. To Be Published

Release Date

2016-05-18

Peptides

Lysine-specific histone demethylase 1A: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

Lysine-specific histone demethylase 1A

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