SMTL ID : 5iue.4 (3 other biounits)

Human leukocyte antigen F (HLA-F) presents peptides and regulates immunity through interactions with NK-cell receptors

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.62 Å

Oligo State

hetero-1-1-mer

Ligands

1 x LEU- ILE- LEU- ARG- TRP- GLU- GLN- ASP: Peptide LEU-ILE-LEU-ARG-TRP-GLU-GLN-ASP(Non-covalent)

LEU-ILE-LEU-ARG-TRP-GLU-GLN-ASP.1: 24 residues within 4Å: Chain A: Y.7, S.9, Y.22, W.62, G.65, Y.66, A.69, N.70, T.73, D.74, A.77, R.84, G.97, M.98, N.99, H.114, H.116, Y.123, T.143, F.146, Y.147, Y.152, E.155, Y.159 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:Y.7, A:Y.7, A:Y.66, A:A.69, A:T.73, A:A.77, A:F.146, A:Y.152 Hydrogen bonds: A:N.70, A:Y.152 Salt bridges: A:R.84, A:R.84, A:E.155 pi-Stacking: A:H.116, A:H.116

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)

NAG.2: 1 residues within 4Å: Chain A: N.86 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dulberger, C.L. et al., Human Leukocyte Antigen F Presents Peptides and Regulates Immunity through Interactions with NK Cell Receptors. Immunity (2017)

Release Date

2017-06-14

Peptides

cDNA FLJ39643 fis, clone SMINT2004023, highly similar to HLA class I histocompatibility antigen, alphachain F: A
Beta-2-microglobulin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
I

B
J

cDNA FLJ39643 fis, clone SMINT2004023, highly similar to HLA class I histocompatibility antigen, alphachain F

Beta-2-microglobulin

Related Entries With Identical Sequence