SMTL ID : 5j1k.1

Crystal structure of Csd2-Csd2 dimer

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.81 Å

Oligo State

homo-dimer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 4 residues within 4Å: Chain A: H.170, F.171, Q.172, S.173 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.172 Water bridges: A:D.169, A:F.171, A:S.173, A:S.173 GOL.2: 5 residues within 4Å: Chain A: V.89, K.90, T.91, N.92, S.93 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.89, A:T.91, A:N.92 GOL.3: 4 residues within 4Å: Chain B: H.170, F.171, Q.172, S.173 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Q.172 Water bridges: B:D.169, B:F.171, B:S.173, B:S.173 GOL.4: 5 residues within 4Å: Chain B: V.89, K.90, T.91, N.92, S.93 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:V.89, B:T.91, B:N.92

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

An, D.R. et al., Structural Basis of the Heterodimer Formation between Cell Shape-Determining Proteins Csd1 and Csd2 from Helicobacter pylori. Plos One (2016)

Release Date

2016-10-19

Peptides

ToxR-activated gene (TagE): AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

ToxR-activated gene (TagE)