- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.49 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 7 residues within 4Å:- Chain A: R.136, R.146, R.174, D.288
- Chain B: K.232
- Ligands: NAD.1, MG.5
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain B- Hydrogen bonds: A:D.288
- Salt bridges: A:R.136, A:R.146, A:R.174, B:K.232
SO4.3: 3 residues within 4Å:- Chain A: E.388, E.392, K.395
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:K.395
SO4.7: 2 residues within 4Å:- Chain B: E.391, E.392
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.391
- Salt bridges: B:K.395
SO4.8: 8 residues within 4Å:- Chain A: K.232, D.264
- Chain B: R.136, R.146, R.174, D.288
- Ligands: MG.4, NAD.6
5 PLIP interactions:2 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:D.264
- Salt bridges: A:K.232, B:R.136, B:R.146, B:R.174
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.4: 5 residues within 4Å:- Chain A: D.264
- Chain B: D.288, D.292
- Ligands: NAD.6, SO4.8
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain A- Metal complexes: B:D.288, B:D.292, A:D.264
MG.5: 6 residues within 4Å:- Chain A: D.288, D.292, I.320
- Chain B: D.264
- Ligands: NAD.1, SO4.2
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Metal complexes: B:D.264, A:D.288
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, S.G. et al., Structure and Mechanism of Isopropylmalate Dehydrogenase from Arabidopsis thaliana: INSIGHTS ON LEUCINE AND ALIPHATIC GLUCOSINOLATE BIOSYNTHESIS. J.Biol.Chem. (2016)
- Release Date
- 2016-05-18
- Peptides
- 3-isopropylmalate dehydrogenase 2, chloroplastic: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.49 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 4 x SO4: SULFATE ION(Non-functional Binders)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lee, S.G. et al., Structure and Mechanism of Isopropylmalate Dehydrogenase from Arabidopsis thaliana: INSIGHTS ON LEUCINE AND ALIPHATIC GLUCOSINOLATE BIOSYNTHESIS. J.Biol.Chem. (2016)
- Release Date
- 2016-05-18
- Peptides
- 3-isopropylmalate dehydrogenase 2, chloroplastic: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
H