SMTL ID : 5j4o.1

Structure of human erythrocytic Spectrin alpha chain repeats 16-17

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.54 Å

Oligo State

monomer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: D.149, Q.151 1 PLIP interactions: 1 interactions with chain A Water bridges: A:D.149 EDO.2: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) EDO.3: 4 residues within 4Å: Chain A: L.35, A.36, L.106, H.110 3 PLIP interactions: 3 interactions with chain A Water bridges: A:L.35, A:A.36, A:A.36 EDO.4: 2 residues within 4Å: Chain A: Q.122, Q.125 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Q.122

2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.5: 6 residues within 4Å: Chain A: D.126, D.129, E.130, A.173, N.176, V.177 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.130, A:A.173, A:N.176 PG4.6: 3 residues within 4Å: Chain A: R.22, E.25, F.26 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cutts, E.E. et al., Interactions of Plasmodium falciparum KAHRP and PfEMP1 with the host cytoskeleton suggest a model for cytoadherent protrusions on the infected erythrocyte surface. To Be Published

Release Date

2017-04-12

Peptides

Spectrin alpha chain, erythrocytic 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Spectrin alpha chain, erythrocytic 1