SMTL ID : 5j64.1

Crystal Structure of Hsp90-alpha N-domain in complex with 5-(2,4-Dihydroxy-phenyl)-4-(2-fluoro-phenyl)-2,4-dihydro-[1,2,4]triazol-3-one

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.38 Å

Oligo State

homo-dimer

Ligands

2 x 6G7: 5-(2,4-dihydroxyphenyl)-4-(2-fluorophenyl)-2,4-dihydro-3H-1,2,4-triazol-3-one(Non-covalent)

6G7.1: 13 residues within 4Å: Chain A: L.40, N.43, S.44, A.47, K.50, D.85, I.88, G.89, M.90, L.99, G.100, T.176, V.178 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:T.176 Hydrogen bonds: A:N.43, A:D.85, A:G.89, A:G.89, A:T.176 Water bridges: A:L.40, A:K.50, A:G.87 pi-Cation interactions: A:K.50 6G7.2: 13 residues within 4Å: Chain B: L.40, N.43, S.44, A.47, K.50, D.85, I.88, G.89, M.90, L.99, G.100, T.176, V.178 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:T.176 Hydrogen bonds: B:N.43, B:D.85, B:G.89, B:G.89, B:T.176 Water bridges: B:L.40, B:K.50, B:G.87 pi-Cation interactions: B:K.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Amaral, M. et al., Protein conformational flexibility modulates kinetics and thermodynamics of drug binding. Nat Commun (2017)

Release Date

2017-12-06

Peptides

Heat shock protein HSP 90-alpha: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Heat shock protein HSP 90-alpha

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