SMTL ID : 5jag.1

LeuT T354H mutant in the outward-oriented, Na+-free Return State

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.58 Å

Oligo State

monomer

Ligands

7 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 11 residues within 4Å: Chain A: G.24, G.26, R.30, Y.108, I.111, E.112, T.115, A.319, F.320, D.404 Ligands: BOG.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.108, A:I.111, A:T.115 Hydrogen bonds: A:R.30, A:R.30, A:A.319, A:F.320, A:D.404 Water bridges: A:N.321 Salt bridges: A:R.30 BOG.2: 8 residues within 4Å: Chain A: Y.107, Y.108, I.111, F.320, L.400, D.401, D.404 Ligands: BOG.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.107, A:Y.108, A:I.111, A:F.320 Water bridges: A:N.321 BOG.3: 6 residues within 4Å: Chain A: P.164, S.165, L.166, Y.169, H.391, F.395 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:P.164 BOG.4: 4 residues within 4Å: Chain A: K.376, H.377, L.380, W.381 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.380, A:L.380, A:W.381, A:W.381 Salt bridges: A:K.376 BOG.5: 3 residues within 4Å: Chain A: I.178, S.181, R.185 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.185 BOG.6: 3 residues within 4Å: Chain A: R.212, L.215, E.217 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.215 Hydrogen bonds: A:R.212 Salt bridges: A:R.212 BOG.7: 8 residues within 4Å: Chain A: L.12, L.16, M.199, P.200, F.203, L.285, A.289, L.293 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:A.289, A:L.293

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Malinauskaite, L. et al., A conserved leucine occupies the empty substrate site of LeuT in the Na(+)-free return state. Nat Commun (2016)

Release Date

2016-06-01

Peptides

Transporter: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Transporter