SMTL ID : 5jbt.1

Mesotrypsin in complex with cleaved amyloid precursor like protein 2 inhibitor (APLP2)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: E.52, N.54, V.57, E.59, E.62 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.52, A:N.54, A:V.57, A:E.62, H2O.3

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 9 residues within 4Å: Chain A: G.194, H.195, G.196 Chain B: G.11, P.12 Chain C: Y.5, R.25, N.26, N.27 7 PLIP interactions: 1 interactions with chain B, 4 interactions with chain C, 2 interactions with chain A Hydrogen bonds: B:G.11, C:N.27, A:G.196 Water bridges: C:L.8, C:N.27, C:N.27 Salt bridges: A:H.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kayode, O. et al., An Acrobatic Substrate Metamorphosis Reveals a Requirement for Substrate Conformational Dynamics in Trypsin Proteolysis. J. Biol. Chem. (2016)

Release Date

2016-11-09

Peptides

PRSS3 protein: A
Amyloid-like protein 2: B
Amyloid-like protein 2: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
X

C
Y

PRSS3 protein

Amyloid-like protein 2

Amyloid-like protein 2

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