SMTL ID : 5jdu.1 (1 other biounit)

Crystal structure for human thrombin mutant D189A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 8 residues within 4Å: Chain B: L.46, P.48, N.53, F.54, T.55, E.56, K.83, I.84 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:F.54, B:T.55, B:T.55, B:I.84, B:I.84 Water bridges: B:E.56, B:E.56, B:I.84

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pozzi, N. et al., Loop Electrostatics Asymmetry Modulates the Preexisting Conformational Equilibrium in Thrombin. Biochemistry (2016)

Release Date

2016-07-13

Peptides

Thrombin light chain: A
Thrombin heavy chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Thrombin light chain

Thrombin heavy chain

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