SMTL ID : 5jed.1

Apo-structure of humanised RadA-mutant humRadA28

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.33 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: E.33, F.34, G.35, S.36, G.37, K.38, T.39 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:G.35, A:G.35, A:S.36, A:G.37, A:K.38, A:T.39, A:T.39 Water bridges: A:K.38, A:K.38, A:T.39, A:Q.40 Salt bridges: A:K.38

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.2: 9 residues within 4Å: Chain A: E.29, L.134, T.135, L.155, L.159, N.177, I.186, S.190, R.194 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.134, A:T.135, A:L.155, A:L.159 Hydrogen bonds: A:E.29, A:N.177, A:R.194

1 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)

MRD.3: 9 residues within 4Å: Chain A: S.8, G.10, S.11, K.12, D.15, M.48, E.54, E.55, G.56 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:K.12 Hydrogen bonds: A:S.8

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 3 residues within 4Å: Chain A: H.163, A.191, T.192 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Moschetti, T. et al., Engineering Archeal Surrogate Systems for the Development of Protein-Protein Interaction Inhibitors against Human RAD51. J.Mol.Biol. (2016)

Release Date

2016-10-19

Peptides

DNA repair and recombination protein RadA: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

DNA repair and recombination protein RadA