SMTL ID : 5jeo.2 (1 other biounit)

Phosphorylated Rotavirus NSP1 in complex with IRF-3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.72 Å

Oligo State

hetero-oligomer

Ligands

6 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain B: D.143, R.153, P.155, R.156 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:D.143, B:D.143, B:R.156 Salt bridges: B:R.153 PO4.2: 5 residues within 4Å: Chain B: R.153, S.154 Chain D: R.26, D.69, V.72 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain D Hydrogen bonds: B:S.154, B:R.156 Salt bridges: D:R.26 PO4.3: 6 residues within 4Å: Chain B: G.150, G.152 Chain D: D.69, R.70, G.71, V.72 7 PLIP interactions: 1 interactions with chain B, 6 interactions with chain D Hydrogen bonds: B:G.150, D:D.69, D:D.69, D:G.71, D:V.72 Water bridges: D:D.69, D:D.69 PO4.4: 4 residues within 4Å: Chain D: D.143, R.153, P.155, R.156 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:D.143, D:D.143, D:D.143, D:R.156 Salt bridges: D:R.153 PO4.5: 5 residues within 4Å: Chain B: R.26, D.69, V.72 Chain D: R.153, S.154 3 PLIP interactions: 2 interactions with chain D, 1 interactions with chain B Hydrogen bonds: D:S.154, D:R.156 Salt bridges: B:R.26 PO4.6: 6 residues within 4Å: Chain B: D.69, R.70, G.71, V.72 Chain D: G.150, G.152 6 PLIP interactions: 5 interactions with chain B, 1 interactions with chain D Hydrogen bonds: B:D.69, B:G.71, B:V.72, D:G.150 Water bridges: B:D.69, B:D.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, B. et al., Structural basis for concerted recruitment and activation of IRF-3 by innate immune adaptor proteins. Proc.Natl.Acad.Sci.USA (2016)

Release Date

2016-06-15

Peptides

Rotavirus NSP1 peptide: AC
Interferon regulatory factor 3: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

C
B

B
A

D
A

Rotavirus NSP1 peptide

Interferon regulatory factor 3

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