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SMTL ID : 5jg8.1

Crystal structure of human acid sphingomyelinase

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.80 Å
Oligo State
homo-dimer
Ligands
4 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
2 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
4 x ZN: ZINC ION(Non-covalent)
2 x ACT: ACETATE ION(Non-functional Binders)
5 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Xiong, Z.J. et al., Structure of Human Acid Sphingomyelinase Reveals the Role of the Saposin Domain in Activating Substrate Hydrolysis. J.Mol.Biol. (2016)
Release Date
2016-07-06
Peptides
Sphingomyelin phosphodiesterase: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

Sphingomyelin phosphodiesterase