SMTL ID : 5jgk.2 (1 other biounit)

Crystal structure of GtmA in complex with SAH

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.33 Å

Oligo State

monomer

Ligands

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.1: 27 residues within 4Å: Chain A: F.13, F.18, Y.22, E.26, T.29, N.55, A.56, C.57, G.58, I.59, G.60, A.61, V.62, D.84, L.85, S.86, M.89, V.110, N.111, A.112, L.113, A.128, F.129, G.130, S.133, F.134, P.135 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:Y.22, A:T.29, A:A.56, A:G.58, A:D.84, A:D.84, A:L.85, A:N.111, A:A.112, A:A.128 Water bridges: A:E.26, A:A.61, A:V.62, A:A.128 pi-Stacking: A:F.134, A:F.134

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: P.166, K.169, T.183, Q.184, K.185 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.184, A:Q.184 SO4.3: 2 residues within 4Å: Chain A: H.191, K.243 3 PLIP interactions: 3 interactions with chain A Water bridges: A:K.243 Salt bridges: A:H.191, A:K.243 SO4.4: 3 residues within 4Å: Chain A: S.197, E.198, S.199 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.197, A:E.198, A:S.199, A:S.199 Water bridges: A:Q.160

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dolan, S.K. et al., Structural, mechanistic and functional insight into gliotoxinbis-thiomethylation inAspergillus fumigatus. Open Biol (2017)

Release Date

2017-03-01

Peptides

UbiE/COQ5 family methyltransferase, putative: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

UbiE/COQ5 family methyltransferase, putative

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