SMTL ID : 5jkn.1

Crystal structure of deubiquitinase MINDY-1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

monomer

Ligands

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 5 residues within 4Å: Chain A: V.115, V.117, Y.163, F.220, N.223 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:V.117, A:N.223

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 4 residues within 4Å: Chain A: F.219, R.221, S.226, L.237 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.226 Salt bridges: A:R.221

1 x HG: MERCURY (II) ION(Non-covalent)

HG.3: 2 residues within 4Å: Chain A: C.131, L.141 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.131

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abdul Rehman, S.A. et al., MINDY-1 Is a Member of an Evolutionarily Conserved and Structurally Distinct New Family of Deubiquitinating Enzymes. Mol.Cell (2016)

Release Date

2016-06-22

Peptides

Protein FAM63A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein FAM63A

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