SMTL ID : 5jl4.1

Inhibitor resistant mutant catalytic core domain of HIV-1 Integrase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: C.16, T.17, H.18, N.106, K.110 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.17, A:H.18 Water bridges: A:C.16, A:N.106 Salt bridges: A:H.18, A:K.110 SO4.2: 3 residues within 4Å: Chain A: K.137, K.139, G.140 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.140 Water bridges: A:K.137, A:K.137 Salt bridges: A:K.137 SO4.3: 3 residues within 4Å: Chain B: K.137, K.139, G.140 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:G.140 Water bridges: B:K.137, B:G.140 Salt bridges: B:K.137 SO4.4: 5 residues within 4Å: Chain B: C.16, T.17, H.18, N.106, K.110 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:C.16, B:T.17, B:H.18, B:N.106 Salt bridges: B:H.18, B:K.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hoyte, A.C. et al., Resistance to pyridine-based inhibitor KF116 reveals an unexpected role of integrase in HIV-1 Gag-Pol polyprotein proteolytic processing. J. Biol. Chem. (2017)

Release Date

2017-10-04

Peptides

Integrase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Integrase