SMTL ID : 5jn5.2 (1 other biounit)

Crystal structure of the D263Y missense variant of human PGM1

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.526, S.528, G.529, R.538 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.528, A:G.529 Salt bridges: A:R.526, A:R.538 SO4.2: 3 residues within 4Å: Chain A: R.244, P.267, N.269 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.244, A:N.269 SO4.3: 4 residues within 4Å: Chain A: G.282, H.283, H.284, Y.291 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.284 Water bridges: A:G.282 Salt bridges: A:H.283

1 x CA: CALCIUM ION(Non-covalent)

CA.4: 4 residues within 4Å: Chain A: S.140, D.311, D.313, D.315 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.311, A:D.313, A:D.315

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Stiers, K.M. et al., Asp263 missense variants perturb the active site of human phosphoglucomutase 1. FEBS J. (2017)

Release Date

2017-02-08

Peptides

Phosphoglucomutase-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Phosphoglucomutase-1

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