SMTL ID : 5jo3.1

PDE5A for NaV1.7

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.49 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 6 residues within 4Å: Chain A: H.80, H.84, H.120, D.121, D.232 Ligands: ZN.2 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.84, A:H.120, A:D.121, A:D.232, H2O.2, H2O.4 ZN.2: 2 residues within 4Å: Chain A: D.121 Ligands: ZN.1 6 PLIP interactions: 1 interactions with chain A, 5 Ligand-Water interactions Metal complexes: A:D.121, H2O.2, H2O.2, H2O.4, H2O.5, H2O.7

1 x 6LK: 1-(5-chloro-6-methoxypyridin-3-yl)-3-methyl-N-(methylsulfonyl)-1H-indazole-5-carboxamide(Non-covalent)

6LK.3: 12 residues within 4Å: Chain A: Y.79, L.233, A.235, I.236, Q.243, A.247, V.250, F.254, L.272, M.284, Q.285, F.288 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.254, A:L.272, A:L.272, A:F.288, A:F.288 Hydrogen bonds: A:Q.285 pi-Stacking: A:F.254, A:F.288, A:F.288 Halogen bonds: A:L.233

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bell, A. et al., PDE5A for NaV1.7. To be published

Release Date

2017-05-03

Peptides

cGMP-specific 3',5'-cyclic phosphodiesterase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

cGMP-specific 3',5'-cyclic phosphodiesterase

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