SMTL ID : 5jqh.2 (1 other biounit)

Structure of beta2 adrenoceptor bound to carazolol and inactive-state stabilizing nanobody, Nb60

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CAU: (2S)-1-(9H-Carbazol-4-yloxy)-3-(isopropylamino)propan-2-ol(Non-covalent)

CAU.1: 17 residues within 4Å: Chain A: W.258, T.259, D.262, V.263, V.266, T.267, F.342, S.352, S.353, S.356, W.409, F.412, F.413, N.416, Y.431, N.435, Y.439 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:W.258, A:W.258, A:T.259, A:V.263, A:V.266, A:F.342, A:F.412 Hydrogen bonds: A:S.352, A:N.435, A:Y.439, A:Y.439, A:Y.439 pi-Stacking: A:F.413, A:F.413

1 x CLR: CHOLESTEROL(Non-covalent)

CLR.2: 4 residues within 4Å: Chain A: I.204, L.229, V.230, R.300 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:I.204, A:L.229, A:V.230, A:V.230 Hydrogen bonds: A:R.300

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Staus, D.P. et al., Allosteric nanobodies reveal the dynamic range and diverse mechanisms of G-protein-coupled receptor activation. Nature (2016)

Release Date

2016-07-13

Peptides

Endolysin,Beta-2 adrenergic receptor: A
Nanobody60, Nb60: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Membrane

We predict this structure to be a membrane protein.
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Endolysin,Beta-2 adrenergic receptor

Nanobody60, Nb60

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