SMTL ID : 5jud.1

Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with uridine-diphosphate (UDP) - GpgS*UDP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.59 Å

Oligo State

homo-dimer

Ligands

2 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.1: 12 residues within 4Å: Chain A: P.54, A.55, L.56, E.58, S.85, G.117, K.118, D.138, S.139, D.140, Y.233, R.263 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:L.56 Hydrogen bonds: A:L.56, A:L.56, A:E.58, A:E.58, A:E.58, A:S.85, A:S.85, A:G.117, A:S.139, A:D.140, A:Y.233, A:R.263 Water bridges: A:K.118 UDP.2: 12 residues within 4Å: Chain B: P.54, A.55, L.56, E.58, S.85, G.117, K.118, D.138, S.139, D.140, Y.233, R.263 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:L.56 Hydrogen bonds: B:L.56, B:L.56, B:E.58, B:E.58, B:E.58, B:S.85, B:S.85, B:G.117, B:S.139, B:D.140, B:Y.233, B:R.263 Water bridges: B:K.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Albesa-Jove, D. et al., Structural Snapshots and Loop Dynamics along the Catalytic Cycle of Glycosyltransferase GpgS. Structure (2017)

Release Date

2017-05-24

Peptides

Glucosyl-3-phosphoglycerate synthase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glucosyl-3-phosphoglycerate synthase

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