SMTL ID : 5jw7.1

Crystal structure of SopA-Trim56 complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.85 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: N.193 Chain B: C.21, C.24, C.41, C.44 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.21, B:C.24, B:C.41, B:C.44 ZN.2: 7 residues within 4Å: Chain B: C.36, L.37, H.38, Y.40, C.56, E.58, C.59 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.36, B:H.38, B:C.56, B:C.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fiskin, E. et al., Structural basis for the recognition and degradation of host TRIM proteins by Salmonella effector SopA. Nat Commun (2017)

Release Date

2017-02-15

Peptides

E3 ubiquitin-protein ligase SopA: A
E3 ubiquitin-protein ligase TRIM56: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

E3 ubiquitin-protein ligase SopA

E3 ubiquitin-protein ligase TRIM56