SMTL ID : 5jwy.1

Structure of lipid phosphate phosphatase PgpB complex with PE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x 46E: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl tetradecanoate(Non-covalent)

46E.1: 15 residues within 4Å: Chain A: Q.50, F.79, A.85, I.86, V.88, G.89, K.93, P.160, G.162, H.163, M.165, F.166, S.169, W.170, L.222 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.79, A:I.86, A:V.88, A:F.166, A:F.166, A:W.170 Hydrogen bonds: A:Q.50 Salt bridges: A:K.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tong, S. et al., Structural Insight into Substrate Selection and Catalysis of Lipid Phosphate Phosphatase PgpB in the Cell Membrane. J.Biol.Chem. (2016)

Release Date

2016-07-20

Peptides

Phosphatidylglycerophosphatase B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Phosphatidylglycerophosphatase B