SMTL ID : 5jze.1 (1 other biounit)

Erve virus viral OTU domain protease in complex with mouse ISG15

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.47 Å

Oligo State

hetero-1-1-mer

Ligands

1 x AYE: prop-2-en-1-amine(Covalent)

AYE.1: 9 residues within 4Å: Chain A: G.76 Chain B: V.35, D.37, G.38, N.39, C.40, W.99, A.150, H.151 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:A.150

2 x FLC: CITRATE ANION(Non-covalent)

FLC.2: 4 residues within 4Å: Chain A: N.8, R.10, H.12, N.14 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:H.12 Hydrogen bonds: A:N.8, A:R.10, A:N.14 Water bridges: A:S.13 Salt bridges: A:R.10, A:R.10, A:H.12 FLC.3: 4 residues within 4Å: Chain B: N.32, R.47, T.54, S.55 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:N.32, B:T.54, B:T.54, B:S.55 Water bridges: B:R.47, B:R.47, B:S.55, B:S.55 Salt bridges: B:R.47, B:R.47

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Deaton, M.K. et al., Biochemical and Structural Insights into the Preference of Nairoviral DeISGylases for Interferon-Stimulated Gene Product 15 Originating from Certain Species. J.Virol. (2016)

Release Date

2016-10-19

Peptides

Ubiquitin-like protein ISG15: A
RNA-dependent RNA polymerase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Ubiquitin-like protein ISG15

RNA-dependent RNA polymerase

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