SMTL ID : 5jzj.1 (1 other biounit)

Crystal structure of DCLK1-KD in complex with AMPPN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.71 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: N.164, D.181 Ligands: AN2.3 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.181, H2O.3, H2O.5

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: R.158, L.192, T.194 5 PLIP interactions: 5 interactions with chain A Water bridges: A:T.186, A:T.186, A:T.194, A:T.194 Salt bridges: A:R.158

1 x AN2: AMP PHOSPHORAMIDATE(Non-covalent)

AN2.3: 21 residues within 4Å: Chain A: I.44, G.45, D.46, G.47, N.48, F.49, A.50, V.52, A.65, K.67, V.97, M.113, E.114, L.115, V.116, D.120, E.163, N.164, L.166, D.181 Ligands: MG.1 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:F.49, A:A.50, A:K.67, A:K.67, A:E.114, A:V.116, A:D.120, A:D.120 Water bridges: A:D.46, A:D.46, A:N.48, A:E.163, A:E.163, A:E.163, A:E.163, A:N.164, A:D.181 Salt bridges: A:K.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patel, O. et al., Biochemical and Structural Insights into Doublecortin-like Kinase Domain 1. Structure (2016)

Release Date

2016-08-24

Peptides

Serine/threonine-protein kinase DCLK1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase DCLK1

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