SMTL ID : 5k0m.1

Targeting the PRC2 complex through a novel protein-protein interaction inhibitor of EED

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

monomer

Ligands

1 x 6PU: (3R,4S)-1-[(1S)-7-fluoro-2,3-dihydro-1H-inden-1-yl]-N,N-dimethyl-4-{4-[4-(methylsulfonyl)piperazin-1-yl]phenyl}pyrrolidin-3-amine(Non-covalent)

6PU.1: 12 residues within 4Å: Chain A: P.26, F.28, Y.79, N.125, E.169, L.171, D.241, Y.296, M.297, R.298, R.345, D.361 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.28, A:F.28, A:F.28, A:D.241, A:Y.296, A:Y.296, A:R.298 Water bridges: A:N.125 Salt bridges: A:E.169, A:D.361 pi-Cation interactions: A:Y.296, A:R.298

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

He, Y. et al., The EED protein-protein interaction inhibitor A-395 inactivates the PRC2 complex. Nat. Chem. Biol. (2017)

Release Date

2017-01-25

Peptides

Polycomb protein EED: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polycomb protein EED