5k11.1 | SWISS-MODEL Template Library

SMTL ID : 5k11.1

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY 3.80 Å

Oligo State

homo-dimer

Ligands

2 x NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NDP.1:	20 residues within 4Å: Chain A: K.70, T.73, I.74, T.75, R.80, N.94, L.286, G.287, E.304, A.305, H.307, G.308, T.309, V.310, T.311, R.312, H.313, S.324, N.326, D.373 17 PLIP interactions: 17 interactions with chain A Hydrogen bonds: A:K.70, A:K.70, A:T.75, A:T.75, A:R.80, A:R.80, A:N.94, A:G.308, A:G.308, A:T.309, A:V.310, A:T.311, A:T.311, A:N.326, A:N.326, A:D.373 Salt bridges: A:H.313
NDP.2:	20 residues within 4Å: Chain B: K.70, T.73, I.74, T.75, R.80, N.94, L.286, G.287, E.304, A.305, H.307, G.308, T.309, V.310, T.311, R.312, H.313, S.324, N.326, D.373 17 PLIP interactions: 17 interactions with chain B Hydrogen bonds: B:K.70, B:K.70, B:T.75, B:T.75, B:R.80, B:R.80, B:N.94, B:G.308, B:G.308, B:T.309, B:V.310, B:T.311, B:T.311, B:N.326, B:N.326, B:D.373 Salt bridges: B:H.313

Links

RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP

Citation

Merk, A. et al., Breaking Cryo-EM Resolution Barriers to Facilitate Drug Discovery. Cell (2016)

Release Date

2016-06-08

Peptides

Isocitrate dehydrogenase [NADP] cytoplasmic: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B