- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 5 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 6 residues within 4Å:- Chain A: R.158, L.231, L.234, T.235, R.236, T.237
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:R.158
GOL.3: 7 residues within 4Å:- Chain A: D.16, S.175, A.176, A.177, Y.215, M.307, Q.310
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:D.16, A:A.176, A:A.177, A:Y.215, A:D.306, A:Q.310
- Water bridges: A:T.178
GOL.9: 7 residues within 4Å:- Chain B: D.16, S.175, A.176, A.177, Y.215, M.216, L.314
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:A.176, B:A.177, B:Y.215
GOL.10: 6 residues within 4Å:- Chain B: R.158, L.231, L.234, T.235, R.236, T.237
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:R.158
- Water bridges: B:R.158, B:D.164, B:L.234, B:T.237
GOL.11: 4 residues within 4Å:- Chain B: L.206, Q.273, K.274, N.277
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:Q.273, B:N.277
- Water bridges: B:N.277
- 5 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 4 residues within 4Å:- Chain A: R.236, T.237
- Chain B: K.125
- Ligands: ACT.5
4 PLIP interactions:1 interactions with chain B, 3 interactions with chain A- Salt bridges: B:K.125, A:R.236
- Hydrophobic interactions: A:R.236
- Hydrogen bonds: A:T.237
ACT.5: 5 residues within 4Å:- Chain A: D.134, T.235, R.236
- Chain B: K.125
- Ligands: ACT.4
2 PLIP interactions:1 interactions with chain B, 1 interactions with chain A- Salt bridges: B:K.125, A:R.236
ACT.6: 7 residues within 4Å:- Chain A: M.80, S.81, T.118, Y.143, G.183, W.279
- Ligands: NAD.1
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:W.279
- Hydrogen bonds: A:S.81, A:S.81, A:T.118
ACT.7: 5 residues within 4Å:- Chain A: K.24, N.221, V.224, K.225, E.228
2 PLIP interactions:2 interactions with chain A- Water bridges: A:E.228
- Salt bridges: A:K.24
ACT.12: 6 residues within 4Å:- Chain B: M.80, T.118, I.119, Y.143, W.279
- Ligands: NAD.8
4 PLIP interactions:4 interactions with chain B- Hydrophobic interactions: B:I.119, B:W.279
- Hydrogen bonds: B:T.118, B:T.118
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Adjogatse, E. et al., Structure and function of L-threonine-3-dehydrogenase from the parasitic protozoan Trypanosoma brucei revealed by X-ray crystallography and geometric simulations. Acta Crystallogr D Struct Biol (2018)
- Release Date
- 2017-11-15
- Peptides
- L-threonine 3-dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 5 x GOL: GLYCEROL(Non-functional Binders)
- 5 x ACT: ACETATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Adjogatse, E. et al., Structure and function of L-threonine-3-dehydrogenase from the parasitic protozoan Trypanosoma brucei revealed by X-ray crystallography and geometric simulations. Acta Crystallogr D Struct Biol (2018)
- Release Date
- 2017-11-15
- Peptides
- L-threonine 3-dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
C