SMTL ID : 5k5h.1

Homo sapiens CCCTC-binding factor (CTCF) ZnF4-7 and DNA complex structure

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.11 Å

Oligo State

monomer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.11, M.13, C.14, H.27, H.31 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.11, A:C.14, A:H.27, A:H.31 ZN.2: 4 residues within 4Å: Chain A: C.39, C.42, H.55, H.59 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.39, A:C.42, A:H.55, A:H.59 ZN.3: 4 residues within 4Å: Chain A: C.67, C.70, H.83, H.88 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.67, A:C.70, A:H.83, A:H.88 ZN.4: 4 residues within 4Å: Chain A: C.97, C.100, H.113, H.118 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.97, A:C.100, A:H.113, A:H.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hashimoto, H. et al., Structural Basis for the Versatile and Methylation-Dependent Binding of CTCF to DNA. Mol. Cell (2017)

Release Date

2017-05-24

Peptides

Transcriptional repressor CTCF: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcriptional repressor CTCF