- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CA: CALCIUM ION(Non-covalent)
- 12 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 9 residues within 4Å:- Chain A: R.66, R.69, W.70, H.413, L.414, R.415, I.416, S.417
- Ligands: SO4.3
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:W.70, A:H.413, A:R.415, A:I.416, A:S.417
- Salt bridges: A:R.66, A:R.69
SO4.3: 6 residues within 4Å:- Chain A: R.66, D.410, Y.411, T.412, H.413
- Ligands: SO4.2
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:T.412, A:T.412, A:T.412, A:H.413
- Salt bridges: A:R.66
SO4.4: 3 residues within 4Å:- Chain A: I.61, R.62, Y.63
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:I.61, A:Y.63
- Salt bridges: A:R.62
SO4.13: 9 residues within 4Å:- Chain B: R.66, R.69, W.70, H.413, L.414, R.415, I.416, S.417
- Ligands: SO4.14
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:W.70, B:H.413, B:R.415, B:I.416, B:S.417
- Salt bridges: B:R.66, B:R.69
SO4.14: 6 residues within 4Å:- Chain B: R.66, D.410, Y.411, T.412, H.413
- Ligands: SO4.13
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:T.412, B:T.412, B:T.412, B:H.413
- Salt bridges: B:R.66
SO4.15: 3 residues within 4Å:- Chain B: I.61, R.62, Y.63
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:I.61, B:Y.63
- Salt bridges: B:R.62
SO4.24: 9 residues within 4Å:- Chain C: R.66, R.69, W.70, H.413, L.414, R.415, I.416, S.417
- Ligands: SO4.25
7 PLIP interactions:7 interactions with chain C- Hydrogen bonds: C:W.70, C:H.413, C:R.415, C:I.416, C:S.417
- Salt bridges: C:R.66, C:R.69
SO4.25: 6 residues within 4Å:- Chain C: R.66, D.410, Y.411, T.412, H.413
- Ligands: SO4.24
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:T.412, C:T.412, C:H.413
- Salt bridges: C:R.66
SO4.26: 3 residues within 4Å:- Chain C: I.61, R.62, Y.63
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:I.61, C:Y.63
- Salt bridges: C:R.62
SO4.35: 9 residues within 4Å:- Chain D: R.66, R.69, W.70, H.413, L.414, R.415, I.416, S.417
- Ligands: SO4.36
7 PLIP interactions:7 interactions with chain D- Hydrogen bonds: D:W.70, D:H.413, D:R.415, D:I.416, D:S.417
- Salt bridges: D:R.66, D:R.69
SO4.36: 6 residues within 4Å:- Chain D: R.66, D.410, Y.411, T.412, H.413
- Ligands: SO4.35
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:T.412, D:T.412, D:H.413
- Salt bridges: D:R.66
SO4.37: 3 residues within 4Å:- Chain D: I.61, R.62, Y.63
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:I.61, D:Y.63
- Salt bridges: D:R.62
- 28 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
NAG.5: 2 residues within 4Å:- Chain A: E.257, N.261
Ligand excluded by PLIPNAG.6: 2 residues within 4Å:- Chain A: N.287, H.312
Ligand excluded by PLIPNAG.7: 2 residues within 4Å:- Chain A: N.446
- Chain B: K.52
Ligand excluded by PLIPNAG.8: 3 residues within 4Å:- Chain A: N.468, Q.476, Y.514
Ligand excluded by PLIPNAG.9: 6 residues within 4Å:- Chain A: K.323, E.475, Q.476, G.487, N.488, N.512
Ligand excluded by PLIPNAG.10: 5 residues within 4Å:- Chain A: R.205, N.207, F.539, N.541, D.545
Ligand excluded by PLIPNAG.11: 2 residues within 4Å:- Chain A: N.594, T.596
Ligand excluded by PLIPNAG.16: 2 residues within 4Å:- Chain B: E.257, N.261
Ligand excluded by PLIPNAG.17: 2 residues within 4Å:- Chain B: N.287, H.312
Ligand excluded by PLIPNAG.18: 2 residues within 4Å:- Chain A: K.52
- Chain B: N.446
Ligand excluded by PLIPNAG.19: 3 residues within 4Å:- Chain B: N.468, Q.476, Y.514
Ligand excluded by PLIPNAG.20: 6 residues within 4Å:- Chain B: K.323, E.475, Q.476, G.487, N.488, N.512
Ligand excluded by PLIPNAG.21: 5 residues within 4Å:- Chain B: R.205, N.207, F.539, N.541, D.545
Ligand excluded by PLIPNAG.22: 2 residues within 4Å:- Chain B: N.594, T.596
Ligand excluded by PLIPNAG.27: 2 residues within 4Å:- Chain C: E.257, N.261
Ligand excluded by PLIPNAG.28: 2 residues within 4Å:- Chain C: N.287, H.312
Ligand excluded by PLIPNAG.29: 2 residues within 4Å:- Chain C: N.446
- Chain D: K.52
Ligand excluded by PLIPNAG.30: 3 residues within 4Å:- Chain C: N.468, Q.476, Y.514
Ligand excluded by PLIPNAG.31: 6 residues within 4Å:- Chain C: K.323, E.475, Q.476, G.487, N.488, N.512
Ligand excluded by PLIPNAG.32: 5 residues within 4Å:- Chain C: R.205, N.207, F.539, N.541, D.545
Ligand excluded by PLIPNAG.33: 2 residues within 4Å:- Chain C: N.594, T.596
Ligand excluded by PLIPNAG.38: 2 residues within 4Å:- Chain D: E.257, N.261
Ligand excluded by PLIPNAG.39: 2 residues within 4Å:- Chain D: N.287, H.312
Ligand excluded by PLIPNAG.40: 2 residues within 4Å:- Chain C: K.52
- Chain D: N.446
Ligand excluded by PLIPNAG.41: 3 residues within 4Å:- Chain D: N.468, Q.476, Y.514
Ligand excluded by PLIPNAG.42: 6 residues within 4Å:- Chain D: K.323, E.475, Q.476, G.487, N.488, N.512
Ligand excluded by PLIPNAG.43: 5 residues within 4Å:- Chain D: R.205, N.207, F.539, N.541, D.545
Ligand excluded by PLIPNAG.44: 2 residues within 4Å:- Chain D: N.594, T.596
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Geng, Y. et al., Structural mechanism of ligand activation in human calcium-sensing receptor. Elife (2016)
- Release Date
- 2016-08-03
- Peptides
- Extracellular calcium-sensing receptor: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.10 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x CA: CALCIUM ION(Non-covalent)
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 28 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Geng, Y. et al., Structural mechanism of ligand activation in human calcium-sensing receptor. Elife (2016)
- Release Date
- 2016-08-03
- Peptides
- Extracellular calcium-sensing receptor: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
A