SMTL ID : 5k9q.2 (1 other biounit)

Crystal structure of multidonor HV1-18-class broadly neutralizing Influenza A antibody 16.a.26 in complex with A/Hong Kong/1-4-MA21-1/1968 (H3N2) Hemagglutinin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-3-3-3-3-mer

Ligands

18 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 2 residues within 4Å: Chain A: P.14, N.15 Ligand excluded by PLIP NAG.2: 3 residues within 4Å: Chain A: N.31, T.311 Chain G: V.105 Ligand excluded by PLIP NAG.3: 3 residues within 4Å: Chain A: N.74, E.112, F.113 Ligand excluded by PLIP NAG.4: 2 residues within 4Å: Chain A: N.158, T.160 Ligand excluded by PLIP NAG.5: 3 residues within 4Å: Chain A: S.38, N.278, V.290 Ligand excluded by PLIP NAG.6: 5 residues within 4Å: Chain B: A.145, E.148, S.149, N.152, T.154 Ligand excluded by PLIP NAG.7: 1 residues within 4Å: Chain C: N.15 Ligand excluded by PLIP NAG.8: 3 residues within 4Å: Chain C: N.31, T.311 Chain I: V.105 Ligand excluded by PLIP NAG.9: 4 residues within 4Å: Chain C: Q.73, N.74, E.112, F.113 Ligand excluded by PLIP NAG.10: 2 residues within 4Å: Chain C: N.158, T.160 Ligand excluded by PLIP NAG.11: 3 residues within 4Å: Chain C: S.38, N.278, V.290 Ligand excluded by PLIP NAG.12: 4 residues within 4Å: Chain D: A.145, E.148, N.152, T.154 Ligand excluded by PLIP NAG.13: 2 residues within 4Å: Chain E: P.14, N.15 Ligand excluded by PLIP NAG.14: 6 residues within 4Å: Chain E: N.31, T.33, T.311 Chain K: E.104, V.105, L.107 Ligand excluded by PLIP NAG.15: 4 residues within 4Å: Chain E: Q.73, N.74, E.112, F.113 Ligand excluded by PLIP NAG.16: 3 residues within 4Å: Chain A: W.215 Chain E: N.158, T.160 Ligand excluded by PLIP NAG.17: 3 residues within 4Å: Chain E: S.38, N.278, V.290 Ligand excluded by PLIP NAG.18: 5 residues within 4Å: Chain F: A.145, E.148, S.149, N.152, T.154 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joyce, M.G. et al., Vaccine-Induced Antibodies that Neutralize Group 1 and Group 2 Influenza A Viruses. Cell(Cambridge,Mass.) (2016)

Release Date

2016-11-30

Peptides

Hemagglutinin HA1: ACE
Hemagglutinin HA2: BDF
16.a.26 Heavy chain: GIK
16.a.26 Light chain: HJL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
M

C
O

E
Q

B
N

D
P

F
R

G
S

I
U

K
X

H
T

J
V

L
Y

Hemagglutinin HA1

Hemagglutinin HA2

16.a.26 Heavy chain

16.a.26 Light chain

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