SMTL ID : 5ka0.1

Protein Tyrosine Phosphatase 1B Delta helix 7, open state

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.1: 3 residues within 4Å: Chain A: K.133, E.134, E.135 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.134, A:E.135 Water bridges: A:E.134, A:E.135

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: P.94, C.97, A.127, Q.128, M.138, F.140 2 PLIP interactions: 2 interactions with chain A Water bridges: A:C.97, A:G.98 GOL.3: 4 residues within 4Å: Chain A: Y.51, V.54, A.222, Q.267 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.267 Water bridges: A:Q.267 GOL.4: 6 residues within 4Å: Chain A: E.81, L.239, R.243, K.253, V.254 Ligands: CL.11 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.243 Water bridges: A:E.81

9 x CL: CHLORIDE ION(Non-functional Binders)

CL.5: 3 residues within 4Å: Chain A: L.42, P.43, K.44 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain A: R.117, V.118, H.180 Ligand excluded by PLIP CL.7: 4 residues within 4Å: Chain A: R.50, P.94, C.126, A.127 Ligand excluded by PLIP CL.8: 5 residues within 4Å: Chain A: G.188, V.189, T.268, D.270, Q.271 Ligand excluded by PLIP CL.9: 4 residues within 4Å: Chain A: K.125, C.220, S.221, R.226 Ligand excluded by PLIP CL.10: 2 residues within 4Å: Chain A: R.84, R.204 Ligand excluded by PLIP CL.11: 5 residues within 4Å: Chain A: R.243, S.248, V.249, D.250 Ligands: GOL.4 Ligand excluded by PLIP CL.12: 4 residues within 4Å: Chain A: Y.25, R.29, R.259, G.264 Ligand excluded by PLIP CL.13: 2 residues within 4Å: Chain A: K.155, S.156 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Choy, M.S. et al., Conformational Rigidity and Protein Dynamics at Distinct Timescales Regulate PTP1B Activity and Allostery. Mol. Cell (2017)

Release Date

2017-03-01

Peptides

Tyrosine-protein phosphatase non-receptor type 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein phosphatase non-receptor type 1

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