SMTL ID : 5kae.1

Crystal structure of human PI3K-gamma in complex with quinoline-containing inhibitor 5g

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: W.433, R.436, I.460, K.463 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.436, A:K.463 SO4.2: 4 residues within 4Å: Chain A: P.63, L.64, W.69, K.145 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.64, A:L.64 Salt bridges: A:K.145 SO4.3: 5 residues within 4Å: Chain A: L.514, F.551, F.555, Q.703, R.706 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.703 Salt bridges: A:R.706

1 x 6RF: 4-azanyl-6-[[(1~{S})-1-(6-fluoranyl-3-phenyl-4-piperazin-1-ylcarbonyl-quinolin-2-yl)ethyl]amino]pyrimidine-5-carbonitrile(Non-covalent)

6RF.4: 17 residues within 4Å: Chain A: K.659, V.660, M.661, P.667, L.668, W.669, I.688, I.736, E.737, I.738, V.739, A.742, T.743, T.744, K.747, M.810, I.820 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:P.667, A:W.669, A:T.744, A:K.747, A:I.820 Hydrogen bonds: A:E.737, A:V.739 pi-Stacking: A:W.669, A:W.669, A:W.669

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gonzalez-Lopez de Turiso, F. et al., Discovery and in vivo evaluation of the potent and selective PI3K-delta inhibitors AM-0687 and AM-1430. To Be Published

Release Date

2017-06-21

Peptides

Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform

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