SMTL ID : 5kak.1

Crystal structure of an uncharacterized NIPSNAP-like domain protein from Burkholderia xenovorans

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

homo-octamer

Ligands

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: R.14, Y.16, Q.38, H.61, R.75, L.78 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.14, A:R.75, A:R.75 Water bridges: A:W.84 EDO.2: 5 residues within 4Å: Chain C: E.33, E.86, Y.87, N.91 Ligands: EDO.3 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:E.86, C:N.91 EDO.3: 4 residues within 4Å: Chain C: E.33, I.37, E.83 Ligands: EDO.2 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:E.33, C:E.83 EDO.4: 4 residues within 4Å: Chain C: E.31, I.35 Chain D: S.108, F.109 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:E.31 EDO.5: 5 residues within 4Å: Chain D: R.14, R.75, M.99 Chain F: L.56, N.57 7 PLIP interactions: 4 interactions with chain D, 3 interactions with chain F Hydrogen bonds: D:R.14, D:R.14, D:R.75, F:N.57, F:N.57 Water bridges: D:R.75, F:N.21 EDO.6: 6 residues within 4Å: Chain H: Y.16, F.30, Q.38, Y.48, H.61, W.84 9 PLIP interactions: 9 interactions with chain H Hydrogen bonds: H:Y.16, H:Q.38, H:Y.48, H:H.61 Water bridges: H:R.14, H:Y.16, H:Y.16, H:R.75, H:R.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Seattle Structural Genomics Center for Infectious Disease (SSGCID) et al., Crystal Structure of Putative uncharacterized protein from Burkholderia xenovorans LB400. To Be Published

Release Date

2016-06-15

Peptides

Uncharacterized protein: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

Uncharacterized protein