SMTL ID : 5kaq.1

Crystal structure of broadly neutralizing Influenza A antibody 31.a.83 in complex with Hemagglutinin Hong Kong 1968.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.51 Å

Oligo State

hetero-3-3-3-mer

Ligands

18 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-covalent)

NAG.1: 2 residues within 4Å: Chain A: P.21, N.22 Ligand excluded by PLIP NAG.2: 6 residues within 4Å: Chain A: N.38 Chain H: P.103, I.104, Y.105, N.106, L.107 Ligand excluded by PLIP NAG.3: 5 residues within 4Å: Chain A: Q.80, N.81, E.119, F.120, R.150 Ligand excluded by PLIP NAG.4: 5 residues within 4Å: Chain A: A.476, E.479, S.480, N.483, T.485 Ligand excluded by PLIP NAG.5: 3 residues within 4Å: Chain A: N.165, V.244 Chain E: S.219 Ligand excluded by PLIP NAG.6: 4 residues within 4Å: Chain A: N.285, V.297, N.298, E.398 Ligand excluded by PLIP NAG.7: 1 residues within 4Å: Chain B: N.22 Ligand excluded by PLIP NAG.8: 5 residues within 4Å: Chain B: N.38 Chain C: P.103, I.104, Y.105, L.107 Ligand excluded by PLIP NAG.9: 2 residues within 4Å: Chain B: N.81, F.120 Ligand excluded by PLIP NAG.10: 4 residues within 4Å: Chain B: A.476, E.479, N.483, T.485 Ligand excluded by PLIP NAG.11: 3 residues within 4Å: Chain A: S.219 Chain B: N.165, T.167 Ligand excluded by PLIP NAG.12: 4 residues within 4Å: Chain B: N.285, V.297, N.298, E.398 Ligand excluded by PLIP NAG.13: 2 residues within 4Å: Chain E: P.21, N.22 Ligand excluded by PLIP NAG.14: 5 residues within 4Å: Chain E: N.38 Chain F: P.103, I.104, Y.105, L.107 Ligand excluded by PLIP NAG.15: 4 residues within 4Å: Chain E: N.81, E.119, F.120, I.121 Ligand excluded by PLIP NAG.16: 4 residues within 4Å: Chain E: A.476, E.479, N.483, T.485 Ligand excluded by PLIP NAG.17: 3 residues within 4Å: Chain B: S.219 Chain E: N.165, T.167 Ligand excluded by PLIP NAG.18: 4 residues within 4Å: Chain E: N.285, V.297, N.298, E.398 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Joyce, M.G. et al., Vaccine-Induced Antibodies that Neutralize Group 1 and Group 2 Influenza A Viruses. Cell (2016)

Release Date

2017-02-22

Peptides

Hemagglutinin: ABE
ANTIBODY 31.A.83 FAB HEAVY CHAIN: CFH
ANTIBODY 31.A.83 FAB LIGHT CHAIN: DGI

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

E
B

C
F

F
H

H
Q

D
G

G
L

I
R

Hemagglutinin

ANTIBODY 31.A.83 FAB HEAVY CHAIN

ANTIBODY 31.A.83 FAB LIGHT CHAIN

Related Entries With Identical Sequence