SMTL ID : 5kca.1

Crystal structure of the Cbln1 C1q domain trimer in complex with the amino-terminal domain (ATD) of iGluR Delta-2 (GluD2)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

homo-tetramer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: V.705, R.706, S.708, Y.836 Chain C: E.679, N.681 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:V.705, A:S.708 CA.2: 4 residues within 4Å: Chain B: V.705, R.706, S.708, Y.836 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:V.705, B:S.708 CA.3: 6 residues within 4Å: Chain A: E.679, N.681 Chain C: V.705, R.706, S.708, Y.836 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:V.705, C:S.708 CA.4: 4 residues within 4Å: Chain D: V.705, R.706, S.708, Y.836 2 PLIP interactions: 2 interactions with chain D Metal complexes: D:V.705, D:S.708

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Elegheert, J. et al., Structural basis for integration of GluD receptors within synaptic organizer complexes. Science (2016)

Release Date

2016-07-27

Peptides

Cerebellin-1,Cerebellin-1,Cerebellin-1,Glutamate receptor ionotropic, delta-2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Cerebellin-1,Cerebellin-1,Cerebellin-1,Glutamate receptor ionotropic, delta-2