SMTL ID : 5kcx.1

Pim-1 kinase in Complex with a Selective N-substituted 7-azaindole Inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x IMD: IMIDAZOLE(Non-covalent)

IMD.1: 7 residues within 4Å: Chain A: F.102, I.105, T.106, D.142, D.206, G.210, D.211 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.142 pi-Stacking: A:F.102

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 4 residues within 4Å: Chain A: H.191, G.192, R.193, S.194 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.193, A:S.194 Water bridges: A:G.192 Salt bridges: A:H.191

1 x 6S3: 4-chloranyl-1-methyl-2-[4-(4-methylpiperazin-1-yl)phenyl]pyrrolo[2,3-b]pyridine-6-carboxamide(Non-covalent)

6S3.3: 10 residues within 4Å: Chain A: L.16, V.24, A.37, K.39, I.76, L.92, E.93, V.98, L.146, I.157 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.16, A:L.16, A:L.92, A:V.98, A:L.146, A:I.157 Water bridges: A:D.158

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barberis, C. et al., Discovery of N-substituted 7-azaindoles as PIM1 kinase inhibitors - Part I. Bioorg. Med. Chem. Lett. (2017)

Release Date

2017-07-19

Peptides

Serine/threonine-protein kinase pim-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase pim-1