SMTL ID : 5ke9.1

mouse Klf4 E446P ZnF1-3 and TpG/CpA sequence DNA complex structure

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.34 Å

Oligo State

monomer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.72, K.74, C.75, H.88, H.92 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.72, A:C.75, A:H.88, A:H.92 ZN.2: 6 residues within 4Å: Chain A: C.42, W.44, C.47, W.49, H.60, H.64 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.42, A:C.47, A:H.60, A:H.64 ZN.3: 5 residues within 4Å: Chain A: C.12, Y.14, C.17, H.30, H.34 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.12, A:C.17, A:H.30, A:H.34

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hashimoto, H. et al., Distinctive Klf4 mutants determine preference for DNA methylation status. Nucleic Acids Res. (2016)

Release Date

2016-09-14

Peptides

Krueppel-like factor 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Krueppel-like factor 4

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