SMTL ID : 5kh9.1

Crystal structure of a low occupancy fragment candidate (5-[(4-Isopropylphenyl)amino]-6-methyl-1,2,4-triazin-3(2H)-one) bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.07 Å
Oligo State
monomer
Ligands
3 x ZN: ZINC ION(Non-covalent)
1 x FMT: FORMIC ACID(Non-functional Binders)
1 x 6T5: 6-methyl-5-[(4-propan-2-ylphenyl)amino]-2~{H}-1,2,4-triazin-3-one(Non-covalent)
33 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)
1 x NA: SODIUM ION(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Harding, R.J. et al., Small Molecule Antagonists of the Interaction between the Histone Deacetylase 6 Zinc-Finger Domain and Ubiquitin. J. Med. Chem. (2017)
Release Date
2016-07-27
Peptides
Histone deacetylase 6: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

Histone deacetylase 6

Related Entries With Identical Sequence

5b8d.1 | 5kh3.1 | 5kh7.1 | 5wbn.1 | 6ce6.1 | 6ce8.1 | 6cea.1 | 6cec.1 | 6ced.1 | 6cee.1 | 6cef.1