SMTL ID : 5kiv.1

Crystal structure of SauMacro (SAV0325)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: C.119, Q.121, H.124, C.126, N.129 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:C.119, A:H.124, A:C.126

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: D.142, R.163, Y.165 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.142, A:R.163, A:R.163 Water bridges: A:D.142

3 x EOH: ETHANOL(Non-functional Binders)

EOH.3: 7 residues within 4Å: Chain A: D.23, M.24, E.27, R.54, V.59, S.60, Y.63 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.63 Hydrogen bonds: A:S.60 EOH.4: 2 residues within 4Å: Chain A: N.22, R.26 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.22, A:N.22, A:R.26 Water bridges: A:R.26 EOH.5: 4 residues within 4Å: Chain A: F.40, W.44, L.74, K.134 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.134

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Appel, C.D. et al., Structure of the sirtuin-linked macrodomain SAV0325 from Staphylococcus aureus. Protein Sci. (2016)

Release Date

2016-07-13

Peptides

Protein-ADP-ribose hydrolase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein-ADP-ribose hydrolase