SMTL ID : 5kmj.1

TrkA JM-kinase with {N}-(2-pyridylmethyl)-2-[2-(2-thienyl)indol-1-yl]acetamide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.04 Å

Oligo State

monomer

Ligands

1 x 6UF: ~{N}-(pyridin-2-ylmethyl)-2-(2-thiophen-2-ylindol-1-yl)ethanamide(Non-covalent)

6UF.1: 18 residues within 4Å: Chain A: G.15, H.16, I.17, N.20, L.91, L.94, I.99, V.100, F.116, L.168, F.173, V.174, H.175, I.193, G.194, D.195, G.197, R.200 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:H.16, A:I.17, A:I.17, A:I.17, A:L.94, A:F.116, A:L.168, A:F.173 Hydrogen bonds: A:I.17, A:D.195 Water bridges: A:K.71, A:E.87 pi-Stacking: A:F.48

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Su, H.P. et al., Structural characterization of nonactive site, TrkA-selective kinase inhibitors. Proc. Natl. Acad. Sci. U.S.A. (2017)

Release Date

2016-12-28

Peptides

High affinity nerve growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

High affinity nerve growth factor receptor

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