SMTL ID : 5kmn.1

TrkA JM-kinase with 1-(2-methyl-4-phenyl-pyrimidin-5-yl)-3-[[2-(trifluoromethyl)phenyl]methyl]urea

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.14 Å

Oligo State

monomer

Ligands

1 x 6UK: 1-(2-methyl-4-phenyl-pyrimidin-5-yl)-3-[[2-(trifluoromethyl)phenyl]methyl]urea(Non-covalent)

6UK.1: 18 residues within 4Å: Chain A: X.1, S.2, S.3, L.4, F.49, K.72, E.88, L.92, L.95, I.100, M.115, F.117, H.176, I.194, G.195, D.196, F.197, G.198 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.49, A:K.72, A:L.92, A:L.92, A:I.100, A:F.117, A:F.117 Hydrogen bonds: A:S.2, A:S.3, A:S.3, A:K.72, A:D.196, A:D.196 pi-Cation interactions: A:K.72

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Su, H.P. et al., Structural characterization of nonactive site, TrkA-selective kinase inhibitors. Proc. Natl. Acad. Sci. U.S.A. (2017)

Release Date

2016-12-28

Peptides

High affinity nerve growth factor receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

High affinity nerve growth factor receptor

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