- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.45 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x 6W7: [(3~{S},4~{R})-4-(6-oxidanylidene-1~{H}-purin-9-yl)pyrrolidin-3-yl]oxymethylphosphonic acid(Non-covalent)
- 8 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: D.187, R.193
- Ligands: POP.4
4 PLIP interactions:1 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:D.187, H2O.1, H2O.1, H2O.1
MG.3: 2 residues within 4Å:- Chain A: E.127, D.128
5 PLIP interactions:1 interactions with chain A, 4 Ligand-Water interactions- Metal complexes: A:D.128, H2O.1, H2O.1, H2O.2, H2O.2
MG.6: 3 residues within 4Å:- Chain B: D.187, R.193
- Ligands: POP.8
4 PLIP interactions:1 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:D.187, H2O.3, H2O.3, H2O.3
MG.7: 3 residues within 4Å:- Chain B: A.73, E.127, D.128
5 PLIP interactions:3 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.127, B:D.128, B:D.128, H2O.3, H2O.3
MG.10: 3 residues within 4Å:- Chain C: D.187, R.193
- Ligands: POP.12
4 PLIP interactions:1 interactions with chain C, 3 Ligand-Water interactions- Metal complexes: C:D.187, H2O.4, H2O.5, H2O.5
MG.11: 2 residues within 4Å:- Chain C: E.127, D.128
5 PLIP interactions:2 interactions with chain C, 3 Ligand-Water interactions- Metal complexes: C:E.127, C:D.128, H2O.5, H2O.5, H2O.5
MG.14: 3 residues within 4Å:- Chain D: D.187, R.193
- Ligands: POP.16
4 PLIP interactions:1 interactions with chain D, 3 Ligand-Water interactions- Metal complexes: D:D.187, H2O.6, H2O.6, H2O.6
MG.15: 2 residues within 4Å:- Chain D: E.127, D.128
5 PLIP interactions:2 interactions with chain D, 3 Ligand-Water interactions- Metal complexes: D:E.127, D:D.128, H2O.6, H2O.7, H2O.7
- 4 x POP: PYROPHOSPHATE 2-(Non-covalent)
POP.4: 7 residues within 4Å:- Chain A: L.70, K.71, G.72, D.187, R.193
- Ligands: 6W7.1, MG.2
9 PLIP interactions:9 interactions with chain A- Hydrogen bonds: A:K.71, A:G.72
- Water bridges: A:A.73, A:D.187, A:D.187, A:R.193, A:R.193, A:R.193
- Salt bridges: A:R.193
POP.8: 7 residues within 4Å:- Chain B: L.70, K.71, G.72, D.187, R.193
- Ligands: 6W7.5, MG.6
9 PLIP interactions:9 interactions with chain B- Hydrogen bonds: B:K.71, B:G.72
- Water bridges: B:A.73, B:D.187, B:R.193, B:R.193, B:R.193, B:R.193
- Salt bridges: B:R.193
POP.12: 8 residues within 4Å:- Chain C: L.70, K.71, G.72, D.128, D.187, R.193
- Ligands: 6W7.9, MG.10
9 PLIP interactions:9 interactions with chain C- Hydrogen bonds: C:K.71, C:G.72, C:D.187
- Water bridges: C:A.73, C:D.187, C:D.187, C:D.187, C:R.193
- Salt bridges: C:R.193
POP.16: 7 residues within 4Å:- Chain D: L.70, K.71, G.72, D.187, R.193
- Ligands: 6W7.13, MG.14
9 PLIP interactions:9 interactions with chain D- Hydrogen bonds: D:K.71, D:G.72
- Water bridges: D:A.73, D:D.187, D:D.187, D:D.187, D:R.193, D:R.193
- Salt bridges: D:R.193
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Eng, W.S. et al., Crystal structure of Mycobacterium tuberculosis hypoxanthine guanine phosphoribosyltransferase in complex with pyrrolidine nucleoside phosphonate. To Be Published
- Release Date
- 2017-09-20
- Peptides
- Hypoxanthine-guanine phosphoribosyltransferase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.45 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x 6W7: [(3~{S},4~{R})-4-(6-oxidanylidene-1~{H}-purin-9-yl)pyrrolidin-3-yl]oxymethylphosphonic acid(Non-covalent)
- 8 x MG: MAGNESIUM ION(Non-covalent)
- 4 x POP: PYROPHOSPHATE 2-(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Eng, W.S. et al., Crystal structure of Mycobacterium tuberculosis hypoxanthine guanine phosphoribosyltransferase in complex with pyrrolidine nucleoside phosphonate. To Be Published
- Release Date
- 2017-09-20
- Peptides
- Hypoxanthine-guanine phosphoribosyltransferase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D